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… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PI and receive permission for their planned work.   … For sequencing or metabolomics projects: data are subject to a  … to the 2-year use-restriction policy as described here. No single project has data under both use-restriction and …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and …

… molecules obviously play a huge role in ecology through cell-cell communication, chemical warfare, and symbiotic … for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow cytometry for … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a metagenome-assembled …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the …

… required documentation here .  … You can request a JGI Single Sign On account at https://signon.jgi.doe.gov . This … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … ) Metagenomes and Single Cells: IMG/M   (citation: …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean … sometimes correlated or anti correlated, also with other cellular functions in the same and as it was other bacteria …

… quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, …

… that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds …