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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … E.M. & Dubilier, N. Symbiosis insights through metagenomic analysis of a microbial consortium. Nature 443, 950-5 …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …

… does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … done a lot of work learning about how to use statistical analysis to prioritize both to analyze our bigger system …

The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain … unknown. And so we've done the sequence similallity network analysis where we look for other receptors with sequence …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …

The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana …

… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT enables industry engagement through … sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to …

… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …

… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …