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… pipelines. You will receive automated emails as raw sequence data becomes available, and as analysis is …
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… product dioxin ubiquinone, which actually comes from a marine bacterium. And so, I was working on chemically … The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain …
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… at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … areas that are less of a focus, I would say. For example, marine research is not so much of a focus within BER … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …
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… about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean … then got funded to work for two years at the Max Planck for marine microbiology in Bremen, Germany. And I wanted to work …
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… been dominated for … well, as long as I can remember, by bacterial research. So it was great to hear her passion and … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered… … it so easily with fungi. So… NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk …
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… major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy … Plant Program is advancing research into plant-microbiome interactions, focusing on how environmental stress and … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
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… in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … of organics will not be considered. Projects targeting marine systems must clearly demonstrate relevance and … energy and environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities of …
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… culture-disconnected. Like we’ll take some soil samples and sequence all the bugs out of that or whatever. And so I was … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? … on plant natural products. Rich, rich in bacterial and marine stuff. So we need more people annotating. It will …
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… flagella in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows … were lost in other forms of Chloroflexota that adapted to marine environments hundreds of millions of years ago. The … Terrestrial Chloroflexota have certain traits that most marine Chloroflexota lost when they returned to an ocean …
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… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … So, one of those is Acinetibacter . This is a genus of bacteria that’s really popped up at funding agencies and the …
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… through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot alkaloids come from … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …
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