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Natural Prodcast Episode 12: Nadine Ziemert
… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  …   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED ONGOING ONGOING CLOSED Who …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network … Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory … of NEON samples and specimens per year. This NEON-focused webinar complements a  recent webinar co-hosted by the JGI …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … show which microbes are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible …
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Natural Prodcast Episode 5: Brad Moore
… to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … the end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …
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Natural Prodcast Episode 18: A CSP Primer
… DAN UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. … with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since I’m … Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … the rest of the archaea and fungal genomes and then work on metagenomes. So yeah. So we’ve taken every public sequence …
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User Advisory Committees
… the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … providing input and advice on JGI policies and practices that affect users and their science including technical …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … samples using targeted and untargeted approaches. The webinar featured  Trent Northen and Ben Bowen of the  JGI … Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, is committed …
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Natural Prodcast Episode 16: Marcy Balunas
… in firmly in the chemistry bucket. [LAUGHS] I don’t know that that’s ever necessarily like a good description of anyone … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … Natural Prodcast presents our interview with Professor Marcy …
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Institutional User Agreements
… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … the legal authority to commit your institution or organization to the terms and conditions in the User Agreement. …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with …
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