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Natural Prodcast Episode 10: A Primer on Genome Mining
Hey, Dan. DAN UDWARY: So I guess this is now– we’ll call this the second season of Natural Prodcast. We’ve both … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s …
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Micro-Scale Applications Group
… the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical … measure environmental microbiome activity levels.This functional assay lets us move beyond cataloging the genes of …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … transformations.” The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … toward generating “with unprecedented precision” the gene functional networks and regulatory networks of a single …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …
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Metagenome Program
… a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better … resources that support user analysis of biogeochemically-relevant pathways, enabling modeling of microbiomes … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, … available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of … do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up …
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Viral Genomics Group
… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … Coclet, C. and Roux, S. …
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Environmental Genomics Group
… communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … Nayfach S et al.  A … analysis strategy for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular characterization capabilities in just … the Webinar: Q(uestion): Who can apply for this proposal call? A(nswer): We work with people from all around the …
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Webinar: Introducing the BioSANS capability
… the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the … instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, EMSL’s … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Fungal & Algal Program
… strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … as symbionts, pathogens, and biocontrol agents dramatically affect plant health. The  1000 Fungal Genomes Project …
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Publication Policy
… analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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