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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et …  14(11):1063-1071 Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a …
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Natural Prodcast Episode 15: Katherine Duncan
Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … Kate Duncan: And somehow, you have to make sense of that information. So the cool thing about molecular networking is– … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is …
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Natural Prodcast Episode 20: Brian Bachmann
… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … JACKIE WINTER: Yeah, I think we actually use some of your information from those days. As a grad student, I think I use … of thought with that. So some people are interested in cave microbial– people are interested in the more extreme …
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Yellowstone Lake Nanoarchaeota
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Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … … GOLD is a web resource for comprehensive access to information regarding genome and metagenome sequencing …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … people were trying to locate and sequence and get the information on biosynthetic gene clusters. And I’ll explain … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …
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Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … key roles in regulating global nutrient cycles. The information gained from understanding the interactions between …
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Natural Prodcast Episode 18: A CSP Primer
UDWARY: It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for … at  naturalprodcast.com , along with transcripts and more information about all of the topics we cover. OK. Long intro … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have …
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The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … why we want to do this. And also to provide a little more information and context for people who might possibly be … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so …
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