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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new … experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
Learn more
Natural Prodcast Episode 6: Marc Chevrette
… where, among lots of other things, he works on the Tiny Earth project, which you’ll hear him describe. [ Go … by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … you for that insight. DAN: So I suppose, coming up with large collections of new microbes and new activities, feeds …
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Community Science Program
… The Community Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic … annotations, and analyses available to the community at large. In most cases where the JGI provides more customized …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards … and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted at … The JGI is inviting researchers using the U.S. Culture Collection Network (USCCN) to nominate their strains for …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… is you will mix together your receptor of interest with genomic DNA, and then allow that to bind. Your receptor also … a thioesterase. And so that thioesterase at the end of this large multimodular protein allows for release from the DNA, … products. BETSY PARKINSON: Yeah. DAN: Are you familiar with Tiny Earth? BETSY PARKINSON: I am familiar with Tiny Earth, …
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Natural Prodcast Episode 15: Katherine Duncan
… it must be about a month, a month and a half later. In September, I went to a centralized computer room, because that … that’s just incredible to think about. And then, from an genomic point of view, I mean, I don’t need to say to you, … have a couple of projects in the lab that also work in microalgae as well. So it’s not just actinobacteria that we work …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Gene expression in eukaryotes was long held to be monocistronic – that … encoded on a single molecule of mRNA – in two species of green algae, Chlamydomonas reinhardtii and Chromochloris … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics … user and no granting of funds.    Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status …   Learn more about our individual calls and other opportunities to …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… have fully decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the … foundation for metabolic engineering in oleaginous algae. By creating a telomere-to-telomere nuclear genome … relationships than other algae, Auxenochlorella ’s reduced genomic complexity can accelerate the design-build-test …
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JGI@25: The Little Alga That Could
… It’s also a model for studying lipid production in other algae that may be more viable for sustainable biofuel … cited in roughly 10% of all since-released publications on green algae. “The Chlamy genome launched over a dozen of new … of arctic-growing Chlamy. Merchant continues to work on the tiny alga with a mighty impact. Her lab has sequenced four …
Learn more
CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic … All proposals will be externally peer-reviewed for scientific merit, … Proposers are encouraged to review the JGI’s sample …
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