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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing …

… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … we want to talk a little bit about. It’s sort of early stages. But I think that is emblematic of some of the … Institution of Oceanography, which of course is part of the University of California San Diego. I walked into the …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …

… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose of the program is to: Build curiosity and illustrate the …

… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – … experimental capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new …

… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral Researcher, UCLA …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a genome … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot of …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is still pretty young, … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …