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… of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231. Accordingly, the U.S. Government retains a … JGI is not responsible for the contents of any off-site pages referenced. … Disclaimer of Liability … Disclaimer of …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered … patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z …

… exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … to analyze metabolites in environmental organisms, communities, and samples including state-of-the-art … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics …

… tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … say a clutch is probably the size of a golf ball and has 25 to 50 eggs. I’m guessing here.  DAN: Sure, sure.  MARCY: … That is one of the really big frontiers for the next stage of natural product drug discovery I think. Or even …

… the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee National … system, reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, I …

IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is … just been looking at like 16S taxonomic profiles of these communities looking at who is in there, but never like what …

… development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … focusing on how environmental stress and microbial communities affect plant growth and productivity. These … accessions) and protocols (transformation, crossing, mutagenesis) are available to the community.   … EcoFABs link …

Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … the idea that you could go internationally to do the next stage of your training and that there might be more to be … to try and create an open source database of all known microbial natural products. So if you think about natural …

… found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …

… tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently … strides in generating genome sequences for members of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of …