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Partnerships Development Team
… help drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil …
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Fungal & Algal Program
Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and producing …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect … a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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Secondary Metabolites Program
… not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often …
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Natural Prodcast Episode 15: Katherine Duncan
And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products … structure information. You still need structure at this stage, and you still need to put that information into …
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Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging
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Plant-Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science … were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …
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Project Management Office
Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality …
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Natural Prodcast Episode 9: Roger Linington
… the idea that you could go internationally to do the next stage of your training and that there might be more to be … to try and create an open source database of all known microbial natural products. So if you think about natural … how best to begin. And so in the end, we did it in several stages. So we started out internally by making a list on the …
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