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Institutional User Agreements
… must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … for the signing official. User Institutions with an active JGI User Agreement older than January 2024 will be required … required paperwork to your institution. (Samples of the JGI User Agreement , JGI User Agreement for Federal Agencies …
Learn more
Natural Prodcast Episode 23: Aaron Puri
… natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a … DAN: Almost like you know that there is. AARON PURI: It’s a planted question Dan. Yeah. So overall I think what we’re …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm plant host … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the key community participants and enabling future metagenomics studies.   …
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User Programs
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.  … Large Scale CSP New Investigator CSP Functional Genomics JGI-TMF Critical Minerals and Materials Status CLOSED CLOSED … who have not been a PI on any approved proposal with the JGI Investigators interested in translating genomic …
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Natural Prodcast Episode 16: Marcy Balunas
… to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … That is one of the really big frontiers for the next stage of natural product drug discovery I think. Or even …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has … Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is … Google Analytics data, the team noticed that a large percentage of Phytozome users who were seeking to download all the …
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Frequently Asked Questions: Project Management
… The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online … (WIP) interface.    For commonly asked questions about JGI’s proposal calls and proposal submission, as well as … The “User” signing the JGI User Agreement will be an authorized representative from …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … in order to challenge or kill off competition, right? And plants do the same sorts of things. And then, bacteria often … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place … Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … Stop by and chat with representatives from KBase and the JGI about collaborative science opportunities. Learn how to …
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Natural Prodcast Episode 18: A CSP Primer
… with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … a mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating …
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Natural Prodcast Episode 5: Brad Moore
… chemicals that are coming out of organisms, whether it be a plant or from the bottom of the ocean, from a sponge, or a … marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … at the US Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: the 50th celebration … we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at Mānoa. I …
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