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JGI & KBase at PAG XXVII
Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE … on their work. BER Plant Genomic Science Workshop Agenda: 6:20 PM Overview and Joint Genome Institute Plant Program …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … computational tools for analyzing viral fragments via IMG/VR and methods to capture  environmental viral …
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IMG ER: a system for microbial genome annotation expert review and curation
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Natural Prodcast Episode 12: Nadine Ziemert
… secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with Nadine … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot of … in the past, we’ve had these monolithic databases, NCBI and IMG , that have a lot of data and really useful data, really …
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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With …
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Secondary Metabolites Program
… not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often … of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory …
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Finding the Fermenters
… from the literature. They then used the JGI’s GOLD and IMG data portals to get information about the genomes and … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the … National Institute of Food and Agriculture grant 2018-67015-27495, the United States Department of …
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