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… in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass spectrometry … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript … sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation …

TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … microbiome members from the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., …

… marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of … as “The Blob.” The event was recorded during a long-term study of microbial communities in the northeastern subarctic … one began in late 2013, when a large patch of warm ocean water about a third the size of the United States began …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … in this field, and written pretty close to the level of technical detail that I think we’re doing here. If you have … blob of protein that’s, you know, wiggling around in the water. And they all come together into this larger structure …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … tell.  ALISON: It could be bacterial blankets, or coats, or water bottles, in a metaphor…. DAN: Or because they’re … I’m definitely seeing why this is such an important area to study. Okay, what’s your third story?  DAN: The third story …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … enthusiasm for fungi. And we talk a lot about some of the technical challenges to that, most of which seem to be … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you …

… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … one of those oxygen atoms from O2 ends up as a molecule of water. DAN UDWARY: Mhm. So oxygenases, they’re oxidizing … of them to be highly related to enzymes that we have been studying since day one in my lab that do oxidative …

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … secrete a lot more things than people do…? Although I don’t study people so maybe I’m wrong. But yeah, I mean, because I … weaken a cell wall, then the bacteria will just pop like a water balloon. But, you know, if you make modifications to …

… resource for the broader scientific community and require constant developments to meet the ever-changing demands of … … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … and their comments. … Data Portal … Genome Portal … Genomes Online Database … Integrated Microbial Genomes and …

… science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … launching the user’s project. See below for details on each step. … Please review our FAQ in advance of …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A …