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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … usage. And I was recently challenged on that on Twitter by Francisco Barona-Gomez. And so he is here to, at least, … that are produced will never change irrespective of the conditions, unless it happens on the long term, millions of …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, … nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass spectrometry …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. … like a lot of people hedge their way into natural products by starting out in synthesis and then discovering more-- … is-- we've been working with both high schools as well as local children's museums so that kids can actually isolate …
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Institutional User Agreements
… of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … to commit your institution or organization to the terms and conditions in the User Agreement.  These include, among …
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Alabama Agricultural & Mechanical University Internship Program
… their scientific skills and collaborating with their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific issues. Our interns say …   Want to see past projects? Read more below         …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … novel enzymatic activities using phylogenomic driven approaches, and understanding the design principles … engineering pathways to function in heterologous hosts, by combining combinatorial synthesis, high-throughput …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national … Access to the Molecular Foundry and use of JGI capabilities is … to the user. Most users of the Molecular Foundry work side-by-side with our scientists at Berkeley Lab. Access to the …
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New Lineages of Life Group
… data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome structure …
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Partnerships: Myco-Ed
… fungal biology teaching labs. The purpose of the program is to: train students and professors in laboratory techniques and data analyses compile original data for … tissue, isolate genes and more. The metadata then goes into iNaturalist. Myco-Ed has:  ~50 lineages selected for …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … is published. The JGI expects that the data produced by the facility result in scientific publications. JGI users … guidelines , and use the contributor list provided by JGI to determine the authorship list. The intent of the …
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Natural Prodcast Episode 18: A CSP Primer
… If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … Science Program , or CSP, which is the main mechanism by which users work with our facility to do science. Since I … involve a population in the lab under a certain stress or conditions, and then they see how does the genome change …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … around us. And we actually don’t know a lot about them by their mate, what their role in nature, how have they been … are silent. Most of them are not produced under laboratory conditions. And really, it would be nice if there was just a …
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