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… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify …

… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … the Letter of Intent; rather proposals are submitted in a single step. … The researcher then submits a proposal for …

… come, though, too when you start talking about going after single gene clusters. BRIAN BACHMANN: That’s right. JACKIE … toward mammalian systems. But it allows us to assay on a single cell level against cell lines and against primary … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …

Nadine? NADINE ZIEMERT: Yes, perfect. I’ve heard it in all variations, and I think that was perfect. DAN UDWARY: I … we’re thinking they’re obligate marine. There’s so far no species or no strains known that really grow in freshwater. … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …

… family would be a set of gene clusters across different species, which all encode the production of either the same … you correlate that with the presence or expression across species in, for example, a strain collection with the … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

Accessing Resources at Multiple DOE User Facilities with a Single Proposal describes the resources available from the …

… about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … , like metabolomics , like some of the more directed genomics approaches, DAPseq and the stabilized isotope probing work that we’re doing, single cell work we’re doing. And using these together along …

… fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome Portal provides unified access to all JGI genomic databases and analytical tools for all JGI … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …

To provide broad plant genomic capabilities, the DOE Joint Genome Institute works … updateable transcriptome resource spanning diverse plant species. It was developed to improve plant genome … handling 18 different species is beyond the capacity of a single lab. Growing different species poses significant …

… metabolites all refer to the chemicals that make species unique and different from one another. They are …