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Natural Prodcast Episode 4: Nancy Keller
… folks at UW and they collect all this DNA from various samples, patients, this and that. They’re doing all this 16S … parasite you really can’t grow well. You have to have it in cell culture. So we are going to see if we can express that … alone – I’m interested in pathogens. It’s just never a single microbe. And we have several recent papers and are …
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Natural Prodcast Episode 1: The Primer, Part 1
… that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe … great conversations that we’ve already recorded with some excellent scientists, and that’s probably how we’ll continue … they figured out that they could culture the plant cells and produce enough that way in really large like 7500 …
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Natural Prodcast Episode 18: A CSP Primer
… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … molecules obviously play a huge role in ecology through cell-cell communication, chemical warfare, and symbiotic … for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow cytometry for …
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Environmental Genomics Group
… communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … Nayfach S et al.  A … analysis strategy for stable isotope probing metagenomics . mSystems , e01280-22. 10.1128/msystems.01280-22 …
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Natural Prodcast Episode 19: Bill Fenical
… we want a chemist to study the ocean. And I didn’t find a single job advertisement. But one day, I decided to really … I spent 30, 40 years diving all over the world and bringing samples into the lab for study. DAN UDWARY: Where were you … that the molecules out there would be toxic to cancer cells. And that started something big. Because at that time, …
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Genomic sequencing of single microbial cells from environmental samples
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Fungal & Algal Program
… into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … seeks to expand our understanding of algal biology using genomics and multi-omics by working with research labs and … research and applied science. By advancing fungal and algal genomics, the program helps lay the groundwork for a …
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Natural Prodcast Episode 14: Nigel Mouncey
… a great opportunity to learn more about JGI, hear some excellent talk from our users and from other invited guests, … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, … and the stabilized isotope probing work that we’re doing, single cell work we’re doing. And using these together along …
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Natural Prodcast Episode 13: Francisco Barona Goméz
I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … for example, in terms of the stereochemistry, such that single changes can lead to a particular high activity … hard to imagine that there will be one function to every single one of these metabolites. So that take us back to the …
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Natural Prodcast Episode 2: The Primer, Part 2
… that – I want to say like lipid bilayer, you know, in the cell.  DAN: It depends on lifestyle. So there are lots of … to pick up metals and bring them back into their cell. And yeah, and then there are other bacteria that, … think of bacteria. You think of bacteria as sort of these single celled organisms, kind of all over. But these kinds …
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Natural Prodcast Episode 23: Aaron Puri
… predict or just understand better the language of microbial cell-cell communication. And he told us about his work in inverse … and they were able to synthesize the genes for every single one of those and put them in individual plasmids and …
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … bioinformatics tools and genome portals, we study lignocellulose decomposition, CO2 fixation, redox reactions, and …
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