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Natural Prodcast Episode 15: Katherine Duncan
Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you are Kate Duncan? … networking, because I really enjoyed the review that you wrote with Marnix on putting that stuff together. It’s been … which caused no end of confusion. And we actually made up a quarter of the master’s class, because there were …
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Fungus Fuels Tree Growth
… poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . By contrast, using a … that directly influence plant phenotype, such as secreted proteins. However,  M. elongata  seems to encourage the plant …
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Mission
… provides advanced genomic capabilities, large-scale data and professional expertise to support the global … scientific approaches to these challenges.     Our homepage video includes external footage from:  University … to the public databases. In 2004, the JGI established itself as a national user facility, and has grown to serve a …
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Making a Lichen Together
… first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more … Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One … now getting more scrutiny is how lichen is able to survive drying out to a potato-chip level of crispiness, only to …
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Frequently Asked Questions: Project Management
… for more details, including a downloadable pdf of products categorized by Science Program.  … The majority of JGI … sequencing. … No. However, the JGI does maintain a list of protocols, found in our HERE (TK) , used successfully by … HERE (TK) .  Note: the JGI does not recommend shipping a dry/lyophilized pellet. It is usually very difficult to …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The … A team of researchers tracked the impact of a large-scale heatwave event in the ocean known as “The Blob.” The event was …
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Partnerships: Adopt-A-Genome
… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and … of submitting, getting feedback , and all the rules and protocols that go along with submitting a paper. That was …
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How to Submit Sequencing Samples
… on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the … . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and … federal holidays). We recommend shipping your samples on dry ice.  Please contact your project manager for alternate …
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Institutional User Agreements
… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … binding contract.   All User researchers must have their home/employing institution sign a JGI Non-Proprietary User … the legal authority to commit your institution or organization to the terms and conditions in the User Agreement. …
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Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola
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Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look … of environmental and energy genomics.  For more information about the science depicted, click here . …
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