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Fungal & Algal Program
… environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … products, and environmental solutions, fostering a bioeconomy powered by nature’s resources. … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic analysis to …
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Natural Prodcast Episode 18: A CSP Primer
… few months, you’re going to hear my last interview with my co-host Alison Takemura, who’s moved on from JGI to do real … Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore … such as improving soil health, carbon sequestration and bioeconomy applications. The program provides high-quality, … drives sustainable solutions in energy, agriculture and ecosystem management. …
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Natural Prodcast Episode 8: Eric Schmidt
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.    Proposal Call … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities …
Learn more
Natural Prodcast Episode 2: The Primer, Part 2
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … is similar to primary metabolism. So if you were, you know, sequencing an organism for the first time, and you’ve never …
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Natural Prodcast Episode 4: Nancy Keller
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural Prodcast! … it so easily with fungi. So…   NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk … everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – to get …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) … resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, … into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 …
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Community Science Program
… The Community Science Program (CSP) provides the scientific … community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for … based on their DOE relevance.  For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Natural Prodcast Episode 11: Marnix Medema
… about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … biological perspective, like what was this bacterium, and why did your group want to study it? Marnix Medema: You mean … gene clusters. And I had heard the first rumors of people sequencing like these enormous numbers of genomes, like 20 …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … falls below these thresholds, you will need to utilize a core facility instead. Proposals may not exceed 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar … Collection Network (USCCN) to nominate their strains for sequencing, as long as they have a scientific question that …
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Natural Prodcast Episode 6: Marc Chevrette
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode 6 … the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our methods … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways …
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