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… episode 9 of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British … products field as it relates to structure elucidation and genome mining, and how we might start to better connect … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …

… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… If you stick around for the next few months, you’re going to hear my last interview with my co-host Alison Takemura, … Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we …

… When submitting sequences to the JGI DNA Synthesis program, please include the … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I … was really before– or kind of around about when the first genome sequencing was done. But natural products– marine … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… metabolites, and specialized metabolites all refer to the chemicals that make species unique and different from one another. They are incredibly important to medicine, the environment, and human health. As the JGI … Prodcast” serves as an important line of communication to the scientific community. Host Dan Udwary talks to …

… for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … products and bioenergy crop enhancement. The program aims to tap into the largely unexplored biochemical diversity within … bacteria, fungi, algae and plants. These compounds are key to organisms' interactions with their environments and with …

… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … collaboration with U.S. and international scientists to drive innovations that align with DOE's missions. … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of …

… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in … and bolster agricultural resilience. The program’s discoveries support a plant based bioeconomy where plants are a … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …

… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, …