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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see what …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
… is using bioinformatics and isotopes to track how viruses influence the flow of carbon in permafrost.  …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our methods was these damn … angry with one another, and trying to unpack all of those interactions. You know, that’s what gets me excited. That’s …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … At the end of the day, all the content produced by microbes the result of millions of years of evolution. And … symbiont, for example, of an ant. So these are very stable interactions that have been evolving for 300 million years, …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As much as we incorporate loads of different …
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Graduate Students Get Thesis Research Opportunity at the JGI
… year, the DOE Office of Science Graduate Student Research (SCGSR) program awards graduate students the opportunity to … metabolism, work on which she will expand with her study of microbes in California’s manmade water transport canals. … of Texas-Austin. Rambo will be studying the influence of viruses on carbon cycling in coastal mangroves. The work …
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Cultivating Symbiotic Antarctic Microbes
The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment environments, water and …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … use natural products necessarily. Fungi are large. They’re microbes, but they’re large microbes. And they have all … the secondary metabolome, of fungi in inter-Kingdom interactions. So fungi, bacteria and their host. And I think …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The Science … (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … of metagenome-assembled viral genomes . The Impact The microbes that play key roles in cycling nutrients such as …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … we really recognize, right?  ALISON: And I tend to think of microbes as being able to secrete a lot more things than … it could be something that’s, it could be a molecule that’s embedded in their – what do you call that – I want to say …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … systems. No one was, at that time, really working with microbes from the ocean. So I felt there was a wonderful … understand a small percentage of overall metabolism. And microbes, and other organisms, have evolved pathways to make …
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