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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The … analyses. The Mycocosm user interface is designed for use by mycologists and researchers, facilitating the transition …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … our collaborations and capabilities to enable great science that will help solve energy and environmental … mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel Sussman and dedicated at our …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … functional genome annotation, improves understanding of the role small molecules play in diverse biological … experimental samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … about drug discovery and why it’s so hard to succeed, and we talk about an ongoing project I’ve been … from the ocean. We didn’t know whether to study bacteria, fungi, archaea, the whole range of microbial life. So, we …
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute … openness, candor, transparency, and creativity framed by a positive, constructive and professional mindset, so … to effectively fulfill the JGI’s mission, we recognize success is dependent on earning the trust of our stakeholders. …
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Genome sequence of a white rot fungus Schizopora paradoxa KUC8140 for wood decay and mycoremediation
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Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … temporary shut down of the sequencing production line to accommodate data migration requirements. Q3 actual Operating … Quarter Total Bases (Billions) Total Bases (Billions) by Platform Operating Hours* Goal Actual Total Actual % of …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … natural product biosynthetic pathways, which led her to a successfully funded JGI CSP project. And we also got to talk … so the goal here then is to understand these regulatory mechanisms so that you can turn on the natural product, say …
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Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi
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Comparative Transcriptome and Secretome Analysis of Wood Decay Fungi Postia placenta and Phanerochaete chrysosporium▿ †
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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