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Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … diversity within secondary metabolites, expanding their potential applications in the bioeconomy including biofuels, … and data for deciphering regulatory networks, and refining experimental approaches to explore the synthesis and …

… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the DOE Energy … systems-level modeling and understanding. JGI and KBase are designated DOE Office of Science Public Reusable Research …

Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … the University of Utah– is looking at the natural product potential of microorganisms from Great Salt Lake, which is a … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … quantitative analysis strategy for stable isotope probing metagenomics . mSystems , … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … you can just take a pill, right? But with a small molecule potentially, you can do that. And so we were really lucky. … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … started during my PhD. And then I actually found out, through a connection of my supervisor, that in parallel, … ones? And which groups or families of gene clusters are potentially novel. So it might yield novel pathways of …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … learning tool that tries to look at patterns of Pfams through a genome and predict where regions of secondary …

… present in an environment that influence system behavior.  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse biological … are generated for metabolites extracted from a variety of experimental samples, including organisms (e.g. microbes, …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … between Bill Gerwick’s lab and doing research in Panama through support from the ICBG training program, which stands … worth putting that time into. ALISON:  What was the role of potential collaborators? Like, what did you pitch to them …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … systems. We optimize our service to the community through responsibly managing our people and resources. Our … The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and computational …