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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … The research efforts of the group have concentrated in demonstrating the power of data science in tackling grand … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … it was– I like interacting with new people and seeing that light bulb go on when all of a sudden like, you know, that … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a limited and … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique … the Joint Genome Institute and the Molecular Foundry in one research proposal. The program seeks research proposals … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for … water. These vents are too deep in the sea to get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. At these vents, and underwater volcanoes,  …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) … of multiple Department of Energy Office of Science National User Facilities into their research. In recognition of … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … And yeah, it just kind of came together in the most delightful and unexpected way. So I had to leave with that … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES
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Machine learning sheds light on microbial dark proteins
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … from polyketides. At least I mean, I haven’t looked at the structures and details for a long time. But… DAN: Yeah, …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and … science user facility located at Lawrence Berkeley National Laboratory ( Berkeley Lab ), and part of the …
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Metabolomics
… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through this … small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the discovery of new …
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