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Microbiome Data Science Team
… other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … of host-virus interactions, the exploration of the functional dark matter as well as the development of novel … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … [project] with JGI, how many flavin monooxygenases are you sequencing, sort of along that vein, of if you have one or … interesting. ALISON NARAYAN: It is a result that has a functional benefit for us, being chemists working with …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and … constitute the largest reservoir of biodiversity and functional versatility on Earth. Their activities and …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … hours.   FY 2024 DOE Metrics There were 2,456 unique* JGI users in FY2024 , which includes Principal Investigators …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better …
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Synthesis
… support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … science by generating data in three overarching categories: Sequencing, Synthesis and Metabolomics. Strong internal … the JGI to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end …
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