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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of … the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that because … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy … Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using … approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Project Management Office
The JGI Project Management Office carries out a number of activities to … help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s … Pennacchio PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… … DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything …
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David Goodstein
With a background in experimental and computational surface … Dr. Goodstein’s group also develops and maintains the Phytozome Plant Genomics web portal. … BS in Physics, New … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
Phytozome workshop held during the June 2022 CROPS Conference at the HudsonAlpha Institute for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy …
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