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Community Science Program
… Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range … Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
Learn more
Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … among many, many major discoveries since the genomic revolution, to me, as a natural part chemist for microbial …
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Natural Prodcast Episode 9: Roger Linington
… So, I’ve always known Roger as an expert in natural product structure elucidation, but more recently, he’s been leading … products field as it relates to structure elucidation and genome mining, and how we might start to better connect … is likely to be in the environment? Can we use this broad-scale view of the chemistry in order to start to make …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … they’re complex, they have different tissues, different structures, different spores. I like looking at that I’m a … contigs. And so most fungi… Oh, the fungi vary in number of chromosomes. Like, ironically, yeast, which has a small …
Learn more
FICUS
… provides customized analysis, the JGI also participates in publication of results. …
Learn more
Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Yeah. DAN: Yeah. So that involves figuring out the structure of that pure molecule. And that can that can take … really simple in terms of understanding it because it’s an assembly line. You just go down the string of beads and each …
Learn more
Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … up a great body of work, with interesting perspectives on evolution of natural products biosynthesis. I think it will … in those two fields and the ability to process samples at scale. So, lots of samples. ALISON: Yeah, how many samples …
Learn more
Sequencing Technologies & Products
…   Overview of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. This … (quality assurance/quality control [QA/QC]), large-scale liquid handling automation, and sequence analysis. … across entire genomes. This technology has been further scaled to a multiplexed DAP-seq (multiDAP-seq) method …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … us to uncover globally distributed molecules with conserved structures, offering fresh insights into DOM's composition. … are able to test hypotheses concerning specific molecular structures involved in DOM cycling. ENVnet can be used in …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a … been sequenced with sufficient resolution to analyze their structure. Scientists found both a gene likely important for … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Synthetic Biology Lab
… synthetic biology applications group. The DNA synthesis and assembly group: Our production group operates as user … to provide access to state-of-the-art DNA synthesis and assembly technologies to the broader community.  We focus … We have developed and continue to improve automated assembly pipelines bringing in new technologies, in …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … think that was the first perhaps the only case of a genome assembly being aided by a chemical entity. Dan: Yeah, we … use our science to connect to problems that are on global scales. So I think that’s one area of science that we’re …
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