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… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … we get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …

… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … staff to onboard users and guide them through the process of working with our facility. This includes help with: … Please review our FAQ in advance of contacting the PMO office.  …

… the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal …

… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … calls. These documents have been shared with permission from the PIs who drafted them.  … Linking lignin engineering to drought stress resilience: RNA-seq and …

… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … on developing methods for converting digital information from sequence databases into biotechnological or … applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic driven approaches, …

… expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability and … for amplifying the JGI’s impact. Data generated from a single investment will be reused for further …

… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If “BERSS” is … with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … performs sequencing, metabolomics and synthesis on behalf of the U.S. Department of Energy Bioenergy Research …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … breakthrough discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides …

… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … to ask to most people. So one of those is like, what’s your origin story in natural products? Why are you doing this? … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … White rot can break down the cellulose, hemicellulose, and lignin in plant cell walls, while brown rot cannot break … , the work was led by a consortium of researchers from the French National Institute for Agriculture, Food and …

… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … and metabolomics. Proposals must request capabilities from both JGI and the Molecular Foundry.  Submission … April 9, 2026  11:59pm PT  Sep 8, 2026 Jan 29, 2027 March 31, 2026 Review Date June 2026 July 2026 October 2026 March …

… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … The sequencing project was funded by the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of …