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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. … So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY …
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … might make this molecule and predicting what kind of enzymes might be involved, and then being able to make those … of, better understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we …
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Natural Prodcast Episode 16: Marcy Balunas
… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … understanding its contribution to ecosystem function in the cellulolytic fungus-growing ant symbiosis JGI Community …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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Plant-Microbial Interactions Group
… associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated … genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … as exploring and exploiting biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in … can it actually turn over? ALISON NARAYAN: So that’s an excellent question. I think that we need enzymes with good …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user … metabolism necessary to design communities, new strains, or enzymes to convert plant biomass components into fuels, … plastics. This drives the DOE’s focus on developing lignocellulosic biomass as a clean, renewable and sustainable …
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Frequently Asked Questions: Project Management
Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith … required documentation here .  … You can request a JGI Single Sign On account at https://signon.jgi.doe.gov . This … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Natural Prodcast Episode 12: Nadine Ziemert
… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … And then you search for – re-search for these biosynthetic enzymes that we think must be similar within the fosmid …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have … quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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