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Natural Prodcast Episode 8: Eric Schmidt
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there and welcome back for … the “Non-Ribosomal Peptide Synthetases” or NRPSs. These are enzyme systems that grab amino acids and stick them together … way – the RiPP way, is to make a protein using the normal cellular way of making proteins, with a ribosome. Then, some …
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Natural Prodcast Episode 5: Brad Moore
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … might make this molecule and predicting what kind of enzymes might be involved, and then being able to make those … of, better understand fundamentally what’s going on in the cell as it responds to its ocean environment. And as we …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique … the Joint Genome Institute and the Molecular Foundry in one research proposal. The program seeks research proposals … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. … So chemicals are their way of talking. You bring up an excellent point though, and I think this is an area that is a … been shown today is it's more a quorum sensing within a single species. DAN: Within a species. Genus? BETSY …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched … to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that … capabilities is free. The JGI supports remote users. Users conduct experiments in their own labs or collect field …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … it interacting with, like, a binding pocket for one of the enzymes, so something that’s metal dependent? Is it– and we …
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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a downloadable …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   … sequencers and platforms dedicated to synthesis, single-cell analyses and metabolomics. At the same time, the team …
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Natural Prodcast Episode 22: Alison Narayan
… DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This continues the … as exploring and exploiting biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in … can it actually turn over? ALISON NARAYAN: So that’s an excellent question. I think that we need enzymes with good …
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Natural Prodcast Episode 12: Nadine Ziemert
… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 of … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … And then you search for – re-search for these biosynthetic enzymes that we think must be similar within the fosmid …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have … quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, …
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