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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It … Embargo : A period in which data is not publicly available in JGI systems or … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
Learn more
Natural Prodcast Episode 12: Nadine Ziemert
… we’re thinking they’re obligate marine. There’s so far no species or no strains known that really grow in freshwater. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …
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Natural Prodcast Episode 18: A CSP Primer
… at JGI start with sequencing, but where else did those sequences go? Like, what are the other scientific tools we … CSP call, we do like to get proposals that are really multifaceted, that do request a diversity of the different … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … data, open to all researchers. Book a session via the appointment calendar for technical help, feedback or a guided …
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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions — with capabilities that had remained largely … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … While an ever-increasing number of phage and virus genomes have been …
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Frequently Asked Questions: Project Management
… Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by …
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Natural Prodcast Episode 8: Eric Schmidt
… long history of research, they’re pretty understudied in comparison to organisms such as bacteria, which chemists … one of the most common animals in the ocean. They’re really species-diverse. I lost track actually of the number. But, … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …
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Natural Prodcast Episode 23: Aaron Puri
… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … usually very beneficial to the field. It’s very, very, very multidisciplinary, is the usual term for that. So yeah. … of carbon in the absence of oxygen. But these are the next step in the food web. So these are organisms– if you …
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Natural Prodcast Episode 17: Cassandra Quave
… of infectious or inflammatory disease and these same species are being used not just by one generation but by … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … compound is not the answer. Some cases, it’s actually multiple compounds acting in synergy which is scientifically …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … The research efforts of the group have concentrated in demonstrating the power of data science in tackling grand …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … ACADEMIC, NON-PROFIT or COMMERCIAL PROPOSALS with MULTIPLE COLLABORATORS: The submitting researcher’s home …
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