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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical …
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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … manager may then schedule and allocate resources for DNA sequencing. … No. However, the JGI does maintain a list of … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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Viral Genomics Group
… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … and they were able to synthesize the genes for every single one of those and put them in individual plasmids and … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … which was a very early genome mining company, back when DNA sequencing of natural product pathways was hard and … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … data analyses compile original data for improving fungal genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome … all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data …
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