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… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … Plant, Algal, Fungal, and Microbial DAP-seq Used for genome-wide identification of transcription factor binding sites. …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …

… artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing metagenomics … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … has completed, your Project Manager will initiate analysis with the appropriate JGI analysis team. During this … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… have– there were some isolated cases but it wasn’t as widespread as we have today. And the sad truth is MRSA and … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … it’s not that easy. There are still not that many plant genomes, certainly nowhere close to bacterial kinds of …

… products field as it relates to structure elucidation and genome mining, and how we might start to better connect … – it’s really a bit of a mess. And many of the system wide tools that people would like to build would greatly … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the metagenomics and gut microbiome, as I think that it’s like a perfect storm in terms of fundamental knowledge and …

… and uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …