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Natural Prodcast Episode 15: Katherine Duncan
… goodness. I mean, if you were to find my scientific papers, that would be Katherine. Dan Udwary: Right. Kate Duncan: But … I just kind of did a big circle of North America. So then I came back and I worked on an EU project, the Scottish … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … of a successful sequencing project. It is imperative that users properly assess DNA or RNA mass prior to shipment …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, and … And it was supposed to be her room now but, well, it became my office due to the pandemic. And she’s sleeping in …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new … and bioproducts. This study lends insights on how the fungus has responded to manmade changes in its ecological … third fungal Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the … proposals within the focused topic areas that can be completed on an accelerated timeline as compared … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 3: The Primer, Part 3
… and written pretty close to the level of technical detail that I think we’re doing here. If you have suggestions for … could understand the genetics of secondary metabolism, it became possible to do something that the field refers to as … using biological systems. You know, if we had had the fungus that was making the Taxol rather than the tree – if …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … he makes fun of me a lot, though I actually edited most of that out. But anyway, here’s our conversation with one of my … the J. Craig Venter Institute, Andy Allen, and Andy then became the co-mentor of Patrick. And Patrick would spend time …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials … in one research proposal.  Submit research proposals  here that integrate genomics with nanoscale science, accelerating … shipping; JGI will handle all subsequent processing from that point. JGI provides users with various outputs free of …
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DNA Synthesis Program
… DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … with U.S. and international scientists to drive innovations that align with DOE's missions. … functional genomics, focusing on developing genetic systems that can address global energy and environmental challenges. …
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Industry Engagement Program
… User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions … User Programs entail a competitive, proposal-based process including peer review. The process is streamlined, with defined …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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