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Natural Prodcast Episode 4: Nancy Keller
… hear which we recorded at the Society for Industrial Microbiology’s Natural Products conference, which took place a … to begin with. So transformation, or manipulation of the DNA of genes and bacteria, occurred much faster earlier than … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   …
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Natural Prodcast Episode 7: Ben Shen
… another one we recorded at the Society for Industrial Microbiology Natural Products conference that was held last … because – mainly it’s due to the emerging technology on DNA sequencing and synthetic biology. But also the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities Investigators who … JGI and the Molecular Foundry.  Submission Deadline Feb 19, 2026 (Proposals due 4/30/26) April 9, 2026  11:59pm PT  …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal submission … the required capabilities, they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for …
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Frequently Asked Questions: Project Management
… Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics … You can visit the Products & Offerings section of our website for more details, including a downloadable … The majority of JGI projects come from the user community. Find out about …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … EMSL and the Protein Data Bank enables predictive ecosystem biology. The collaborations present exciting possibilities …
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Natural Prodcast Episode 22: Alison Narayan
… interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural Products meeting … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical capabilities … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the minimum is 100 kb, and for …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… genome. They were interested in genes involved in repair of DNA damage, and those associated with atherosclerosis and … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … – problems that might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe they don’t have available in their labs, …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the JGI’s portfolio of user companies. Now the Department of Energy is uniting … to test hypotheses via designed and assembled physical DNA constructs that can then be functionally characterized.  …
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