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… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … This work was supported by the U.S. Department of Energy Office of Science under Contract No. …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2025 DOE Metrics There …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… The Facilities Integrating Collaborations for User Science (FICUS) call … for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …

… The Facilities Integrating Collaborations for User Science (FICUS) … to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. …

… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … a good catalog of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … is our interview with Nadine Ziemert, from the University of Tübingen. This continues our short series of genome …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …

… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …