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The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …

DAN UDWARY: You’re listening to the Department of Energy … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … transferred. Things shift between even different genus. And so often, secondary metabolism genes don’t look …

Miscanthus  sequence offers insights into benefits of polyploidy … genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been published. Analysis of … biofuel grasses can be studied from simpler (and smaller) models, Miscanthus has a large and complex genome whose …

Data produced and released by the US Department of Energy … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … were new genera, these basic taxonomic group called the genus. We found there were new genera in the ocean that no …

… … Dan Udwary: You’re listening to the Department of Energy … genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … I think this is really– I personally like this really as a model for a collaboration. You have your code as open source …

… … DAN: You’re listening to the US Department of Energy Joint … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … actinomycete bacterium called Salinospora . This new genus was discovered by friends and colleagues at the …

The Community Science Program Large Scale Call is focused on genomic science projects … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … are of relevance to bioenergy-related feedstock crops or model plants. Projects targeting marine systems must clearly …

Uncovering associations between plant roots and fungi that can help or harm plant host … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. …

… … DAN: Hello, everyone, and Welcome back for Episode 14 of … as the fermentation process itself. And we built a nice modeling feedback loop for the fermentation work, which … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …