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The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass …

Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in plant roots. They play …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …

See below for examples of successful Letters of Intent to our Community Science … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory … interactions to enable advanced bioenergy crops … Characterization of simplified soil communities with high …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on … large-scale, time-series metagenomic data with detailed characterization of model systems to explore the dynamics of …

… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological … of our Community Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the special, natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. … So what we’ve got here is, I just grabbed a photo of a “biochemical pathways” chart. So if you spend any time …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE Metrics There … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on …

A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … for a long time by many, many bacteria – and fungi and plants. And so that’s the power and the promise of, I guess, … also say that we don’t always know the intimate details, biochemically, of what’s happening. So you know, it’s easy …