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Plants are complex organisms that harbor a fantastic diversity … transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better understand the … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community …

The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … or dedicated compute infrastructure is required to perform computational analyses. The Mycocosm user interface is …

… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … compounds. To support users, our efforts include developing computational tools for predicting biosynthetic gene … deciphering regulatory networks, and refining experimental approaches to explore the synthesis and function of these …

… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … preferences A 10″ Simple Rules” article on increasing computational skills among biologists JGI CSP Proposal: …

… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … fascinating. And I fell in love with actinomycetes. I loved approaching biology from a chemistry background. Dan Udwary: … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

The User Support Analysis group provides computational analysis for new technology development and JGI user science …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes …

The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI contributions to advancing the frontiers of environmental and energy genomics. … science depicted. The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by Berkeley-based …

…     2,140     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours target is … hours. Other DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, … datasets. [Download PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download …