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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic … approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and …
Learn more
Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and … proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of … Access to the Molecular Foundry and use of JGI capabilities …
Learn more
Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of … my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for a couple … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy … ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. … Beyond providing a scalable solution for production of high-quality fungal …
Learn more
Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. … oftentimes will bind to receptors within biosynthetic gene clusters. Specifically, these are Tet repressors that … hypothesis is correct and whether we can activate these, utilizing some of these already synthesized molecules. DAN: …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics … projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities Investigators who …   Learn more about our individual calls and other opportunities to work …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … EMSL and the Protein Data Bank enables predictive ecosystem biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … Through its partnership with NERSC and the DOE Energy Sciences Network …
Learn more
Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … spectrometry hardware, software, new developments in NMR methods, ultra fast methods for acquisition. Things like …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … think that was the first perhaps the only case of a genome assembly being aided by a chemical entity. Dan: Yeah, we …
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Data Policy
… Data produced and released by the US Department of Energy … Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … of certain types of data to support their use by those generating data. The JGI Data Policy applies to research …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring … of multiple species; stricter filtering criteria provides a robust community dataset of improved quality; deep insights …
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