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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of … I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … similarity to a gene cluster with a known compound from the reference database: It must be identical. It must be that …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of … algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of … and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a … a scalable solution for production of high-quality fungal reference genomes, this program is an important initiative … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint … delivery mechanism. So, the polymer structure has specific preferences to cancer cell lines. So, that was introduced in … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …
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