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Improving the Cacao Genome and Phytozome
… will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … high quality modern standard and includes RNA-seq data. The improved  T. cacao Matina 1-6 genome is now available for … comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the …
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Mission
… Biological systems hold extraordinary potential to power innovation in energy, … information into actionable insights and solutions. Genome-enabled biology provides solutions to strengthen …
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Partnerships: Myco-Ed
… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … solution for production of high-quality fungal reference genomes, this program is an important initiative that …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … us who work in fungal natural products, especially in the old days, saw how hard it was – it felt kind of like … which might lead you to changes in bioactivity, and new uses for these peptides in medicine or materials science …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding … for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of … of chromosomes inherited from each parent. It also has 700-fold greater contiguity, meaning the genome is reconstructed …
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JGI-TMF Critical Minerals and Materials Call
… to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … should be submitted through the Molecular Foundry User Portal . All proposals undergo technical review by JGI staff …
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Viral Genomics Group
… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … include:  in silico host prediction for uncultivated phages improved annotation and functional prediction for phage …
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Analyze Data
… JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  Notice Data Portal files will be inaccessible July 22–July 24 for …
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Frequently Asked Questions: Proposal Submission
… and Publication .   Except for applicants to the CSP New Investigator call, investigators may have existing … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact … range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … podcast about natural products. And natural products is an older term for the special, natural chemical compounds that … Secondary Metabolites Science Program here at JGI. It’s a new group formed under the director who has also got a long …
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Offerings & Capabilities
… in strain engineering and functional assays and supporting new methodologies to enhance the integration of various data …
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New Tricks with Old Bones
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