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Data Policy
… PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … for which JGI has not yet received samples as of Sep 30, 2021 are subject to a 2-year embargo to maintain the … were generated who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… materials. The proposal submission deadline is March 31, 2026 .  … (CMMs). Click for a list of CMMs and the results of the 2023 DOE Critical Materials Assessment . While we expect …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … Biosciences Associate Laboratory Director, of the 100-page document with over 200 actionable milestones. JGI … We encourage you to read through it, provide us feedback and to help us calibrate progress toward our near- …
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How To Use Our Systems
… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …
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Environmental Genomics Group
… into DNA by active microbial populations (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) we are able to quantify isotope incorporation across a … Acids Research , Volume 51, Issue D1, 6 January 2023, Pages D723–D732, https://doi.org/10.1093/nar/gkac976 Roux, …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE …
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Natural Prodcast Episode 19: Bill Fenical
… seems hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … bottom mud, all over the world. We created ways to go out, 20 miles offshore, and sample at 4,000 meters depth, get … the complex biology and production that we couldn’t do. So 2021, we have two drugs in late phase III, both for cancer. …
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Natural Prodcast Episode 2: The Primer, Part 2
… molecules and their discoveries over a stretch from 1940 to 2000. As you can see, from the 1940s, into the 50s into the … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to … the  RSS link , and via most other commonly-used podcast feeds. Please subscribe, and leave a review! If you have …
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Natural Prodcast Episode 15: Katherine Duncan
… inside them. And this was, I think it must’ve been about 2001, maybe, and so it was before smartphones and before … It’s them that do it. They created the Wiki. They edit the pages. They add the content. They run the Twitter account. … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N …
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Viral Genomics Group
… Coclet C, Camargo AP, Roux S. (2024) MVP: a modular viromics pipeline to identify, filter, … Coclet, C., Sorensen, P.O., Karaoz, U. et al. (2023) Virus diversity and activity is driven by snowmelt and … Neri U., Wolf, Y., Roux S., Camargo A.P., et al. (2022) Expansion of the global RNA virome reveals diverse …
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Natural Prodcast Episode 1: The Primer, Part 1
… I have been in – working in secondary metabolism for almost 20 years now. Which when I did the math, that was a surprise … drug. It was the largest selling drug back in the early 2000s for cancer. You know, a billion dollar drug. But where … got the podcast. If you have a question, or want to give us feedback, tweet us @JGI, or to me @danudwary. If you want to …
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Microbiome Data Science Team
… the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global …
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