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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I … never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … looking at emails and I just saw this pop up. And saw a C&E News job little box and I thought, wow, this would be …
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Streamlining Regulon Identification in Bacteria
… sequencing, they were able to identify the target genes of 11 sigma factors in Streptomyces coelicolor . The Impact As … and were able to identify the associated target genes in 11 of those. That work published in Nature Communications on …
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Finding the Fermenters
… records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that fermentative … more than 400 cultured rumen prokaryotes from the  Hungate1000 project . They also used the tool to predict possible … genome on KBase … Narrative for Porphyromonadaceae sp. W3.11 genome on KBase … The phenotype and genotype of …
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Natural Prodcast Episode 17: Cassandra Quave
Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week is Professor Cassandra Quave … then my lab pleaded mercy, and I said, OK, we’ll just do 2011 to present day. And it was still like 4,000 articles we … plants and bringing them back is not your jam, the good news is there’s this amazing resource that can be provided …
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Natural Prodcast Episode 6: Marc Chevrette
… project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also … at over 270 places now worldwide with a rate of around 10,000 students a year. And that was those numbers were … that’s really popped up at funding agencies and the popular news recently because a lot of soldiers in the Iraq and …
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Natural Prodcast Episode 12: Nadine Ziemert
… of secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with … Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think you’ll enjoy it. So here it is, episode 12 with Nadine Ziemert. DAN UDWARY: Hey, Alison. ALISON …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… in these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… single cell – a symbiont of the green sharpshooter. In 2012, single cells isolated from the microbes found in the oil … microbial populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. …
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Tracing the Evolution of Shiitake Mushrooms
… atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the … FEDER funds) to F.J.R.-D., S.C., and A.T.M., grant PID2019-103901GB-I00 of the Spanish Ministry of Science and …
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A Plant Root Atlas for Tracking Developmental Trajectories
… patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the information with … identity mutants . Dev Cell. 2022 Feb 28. S1534-5807(22)00033-8.doi: 10.1016/j.devcel.2022.01.008 Relevant Links: … Single-Cell Data Viewer Tool on Phytozome Biosciences News:  Plant Single-Cell Solutions for Energy and the …
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Fungus Fuels Tree Growth
… and without an inoculation of the  M. elongata strain PM193 added to a diluted soil mixture, publishing  the results … States Department of Energy under contract DE-AC02-05CH11231. Support was also provided by the NSF Zygolife … and National Science Foundation (concept ID 10.13039/100000001; grant number DEB 1737898). …
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Natural Prodcast Episode 4: Nancy Keller
Wisconsin. Like we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should … first started out the natural product community was almost 100% bacterial. Only people working in mycotoxins worked … do you check if they’re there? Like we always talk about 16S for bacteria, but we don’t talk about it so easily with …
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