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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to …

… users through a BER data ecosystem.  A data ecosystem is a connected resource where data from different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein … specifically optimized for high-performance computing environments. …

… through working directly with specific universities, continuing education programs in the Bay Area, and established programs affiliated with the … The JGI and UC Merced have had a long-standing internship partnership that started in the … Modeled on the JGI-UC Merced internship program, a similar …

… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user …

… The Joint Genome Institute and the Molecular Foundry have launched a … to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. …

… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … we also worked in DIANs. We worked on that. We had separate projects with John Thorson and Ben Shen. [Listen here to Ben …

… Below is a brief description of the process needed to prepare and ship samples for … the process. If you have any questions, please contact your Project Manager or jgi-project[email protected] . … and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting material is …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass …

… for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI … accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a …

… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a research project are appropriately recognized and credited for their … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated …

… new algorithms, models and tools in support of DOE mission priorities. Data discoverability and accessibility are … July 22–July 24 for computing upgrades . We regret any inconvenience. Effective July 27, 2026, the JGI will move to a … the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional …