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Microbial dark matter ecogenomics reveals complex synergistic networks in a methanogenic bioreactor
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Unraveling the functional dark matter through global metagenomics
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Natural Prodcast Episode 15: Katherine Duncan
Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … I wouldn’t say I was one of these people that wants to study oceanography and was fascinated by the oceans, though … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay … JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further … kinds of topics. It’s amazing to have access to rock star scientists who have done the groundbreaking work you’ve been …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … And so we’ve been working on that. But why small molecules matter is because this pain drug, this peptide that’s used, … crack this case, then that would open up our field to other study. And so it was kind of an early example, to try to …
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JGI Portals
… and require constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … a place where the community can upload new data for use by scientists and the public, and provide programmatic access …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — … with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the JGI, received a message from Andrea … year.  Until then, the column had been written solely by scientists affiliated with the Wellcome Sanger Institute in …
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Data Policy & Support
… practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … Additional Resources  …
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Natural Prodcast Episode 16: Marcy Balunas
Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial aggregate, or a specific subset of free-living …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room with a flashlight, only able to clearly identify … Data Science group . Shining a Light on Functional ‘Dark Matter’ Microbial communities living everywhere from soils …
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