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… development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … interactions, focusing on how environmental stress and microbial communities affect plant growth and productivity. … meraculous. It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an …

Canada. I just got back from a conference in Canada on antimicrobial resistance sponsored by the Garner foundation. And … so I’m you know, I’m a little bit familiar coming from a microbial ecology background myself, but not to this degree. … is where I’m going.  So specifically to the fields of microbial ecology and community dynamics and understanding …

… just focused on looking at studies that assess the MIC or Minimum Inhibitory Concentration of plant extracts and … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …

… right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … metabolism for almost 20 years now. Which when I did the math, that was a surprise to me, too. I started working in … We’re looking at a schematic of different pathways in a microbial cell, it looks like. It could be a eukaryotic …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …

I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … as the fermentation process itself. And we built a nice modeling feedback loop for the fermentation work, which … to society really does give you the chance to build those networks of folks that you may not normally run into or …

… the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual CSP … CSP. We need to work in a certain scale. So there’s a minimum. But again, somebody, a PI, should submit a fairly …

… in enabling systems biology analyses, such as metabolic modeling, that go well beyond genome annotation and … and individual genomes to metagenomes to systems-level modeling and understanding. JGI and KBase are designated DOE …

… physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial aggregate, or a specific subset of free-living … sample, annotation ( IMG/M ), binning Depends on project Microbial Minimal Draft, Isolate Draft quality microbial …

… genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during … plant-fungal symbionts … Elucidation of the gene regulatory networks governing terpenoid-mediated plant environment …

… to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, …

… went on to advance basic science by sequencing scores of microbial species as well as several model organisms and … behavior of microbiomes and manipulate them to facilitate microbial solutions to challenging environmental … and bioproduct development. Develop an understanding of microbial and fungal metabolism necessary to …