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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth … took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that … conversation with a quick recap of how plants, in general, work. KAROLINA:  We all know plants take up water through …
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Natural Prodcast Episode 5: Brad Moore
… first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … had experienced the largest bloom ever observed on planet Earth. This was the 2015 Pseudonichia diatom bloom. It made … that Merck has, that was published in Science just a few months ago, where Merck scientists and Codexis scientists …
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Natural Prodcast Episode 8: Eric Schmidt
… University of Utah. I’ve known Eric for a long time – we worked together on Aflatoxin biosynthesis while he was a … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … our specialty. That’s where most diversity of life on earth is located. ALISON:  Have you been continuing the …
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was working for Bill Gerwick as …
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Publication Policy
… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … project are appropriately recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … JGI Staff: Upon request, JGI staff will provide Users with a …
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Natural Prodcast Episode 12: Nadine Ziemert
… . You should know we’ve recorded this a few months ago when we were at the height of the initial spread … Dittmann, where I did my PhD later. And she happened to work with nature products from cyanobacteria. So that’s how … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE …
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Natural Prodcast Episode 15: Katherine Duncan
… about Antarctica, and we want to talk about molecular networking, because I really enjoyed the review that you wrote … until I was back at University, so it must be about a month, a month and a half later. In September, I went to a … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … Alison Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome …
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: preparing a …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make this … you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … BETSY PARKINSON: Yeah. DAN: Are you familiar with Tiny Earth? BETSY PARKINSON: I am familiar with Tiny Earth, yeah. …
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