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Homepage
… homepage video includes external footage from: University of Delaware; Laura.Selbmann©PNRA. All the sampling … of University and Research; all specimens collected and fungi isolated are preserved in the Culture Collection of Fungi from Extreme Environment, the Italian National …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … there undefended, and, so, many of them are loaded with chemicals that they make that are very potent in preventing … marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your …
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Natural Prodcast Episode 4: Nancy Keller
… So it was great to hear her passion and enthusiasm for fungi. And we talk a lot about some of the technical … they only talk about the bacteria. My god! 30% of our gut microbes are fungi. It’s really frustrating to me. Maybe … you can think about.   DAN: What kind of genomic resources are available these days for the natural product …
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Environmental Genomics Group
… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which … monitoring, bioremediation, and the discovery of novel enzymes and bioactive compounds. …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … that eat methane, so they can use methane gas as their sole source of carbon and energy. And it was before group meeting … to identify what’s being made. In some cases it might be novel, in some cases it might be– might be a known structure …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … metabolites, and specialized metabolites all refer to the chemicals that make species unique and different from one … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan …
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Sequencing Submission Requirements for DNA Synthesis
… Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an open source desktop application written by M. Wayne Davis or … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … Antibiotics, yeah, to fight each other to over scarce resources. Yeah. BRIAN BACHMANN: Or to communicate. DAN … in order to put them together to build pathways, to make novel compounds, or to find analogs. And that was Warp …
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Microbiome Data Science Team
… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … breakthrough discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal … microorganisms, by sequencing large populations of bacteria and archaea in their natural environments using …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … is to create a course and a network of people to crowd-source antibiotic discovery. So like I just mentioned, … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … a marine actinomycete bacterium. So they look kind of like fungi but also make these mycelia. They kind of look like … talked about at the JGI meeting. DAN UDWARY: What’s your gut feeling about that sampling? Do you find different …
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