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… assembled genomes to synthesized DNA constructs to metabolomics data, depending on the specific product types … advice. … For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department … of the JGI. … No, the proposal is only for sequencing, metabolomics and/or synthesis effort at the JGI. There is no …
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… question. So we offer, in addition to sequencing, we offer metabolomics and also DNA synthesis. And we consider these … the DOE emission space of bioenergy, carbon cycling, biogeochemistry, bioproducts. So we cannot work on health … up with others, right? If the research lab is focused on geochemistry and it’s really strong, has been working on the …
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… within the organization in terms of the sequencing and the metabolomics, synthetic biology. But we need people from … in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and …
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… are many different group behaviors that would not be advantageous from a fitness perspective for these individual cells … like E. coli , and then being able to look using the metabolomics capabilities also at JGI — it’s really cool … niche here is a lot of natural products labs look at maybe geographical diversity to try to find new natural products …
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I kind of inferred through the stories I told you about geosmin, which is a bacterial sacred metabolite, and ergot … They grow in the soil. These are the same guys that produce geosmin. And so we are now looking at another photograph of … in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and …
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… key component is data integration with genomics with metabolomics and with transcriptomics because I think we can … in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and …
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… might need special technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe they don’t … You picture that? That smell is a chemical compound called geosmin that’s produced by soil bacteria that live all over … them in our food. That’s crazy! DAN: Yeah, just like the geosmin – they’re everywhere and you don’t always …
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… technology under one roof. So that really facilitates. The metabolomics, another technology that to, monitor if all … probably pitch them in two different categories. One is a geographic distribution. So they were collected from 108 … in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and …
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… to transfer technology any time, trying to do this across geographical and cultural and language borders, barriers, is … in these other capabilities, like synthetic biology , like metabolomics , like some of the more directed genomics … genome mining with using DNA synthesis to express clusters metabolomics to be able to actually identify and possibly …
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… in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and …
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… well plates. And we can use our fancy multiplexed activity metabolomics method to tell us what’s active, which peak is …
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How would you try to tackle that? Would you do that through metabolomics or sequence or both or–? MARCY: So we do so much more metabolomics than I ever thought we would. DAN: Yeah that’s … a bit of work figuring out how to filter out noise from the metabolomics data. We’ve done a lot of work learning about …
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