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… The Genome Insider podcast brings listeners into the science …

… and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting material is … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … For sequencing projects, the PI will receive an automated email once the …

… for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, … accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a … Office. For questions about the appropriateness of projects or experimental design, click below to schedule …

… Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using long-read sequencing. Exact … Genomics Institute will produce HMW DNA needed for these projects. Assembly, annotation for ( Phytozome for plant, …

… The mission of the Joint Genome Institute is to serve the scientific community as a … and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and … For sequencing projects, once work is under way, raw sequence data is …

… The Joint Genome Institute and the Molecular Foundry have launched a … free of charge, including data such as fully annotated genome assemblies or differential gene expression results. For DNA synthesis projects, JGI ships physical materials like expression … DOE Critical Materials Assessment . While we expect most projects will focus on one or more elements in the CMM …

… information into actionable insights and solutions. Genome-enabled biology provides solutions to strengthen … targets (i.e. corn, sugarcane, rapeseed/canola, palm oil). Projects focused on environmental treatment, mitigation, or … substances (PFAS), and harmful algal blooms. Projects focused on the fundamental science of animal and …

… assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI … data and analysis products produced through all user projects accepted FY22 and later. … data and analysis products produced through all user projects accepted before FY22. …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … filter, cluster, annotate, and bin viruses from metagenomes. mSystems 9:e00888-24. … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature Biotech. 37, 29–37. …

… for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …

… staff to resolve issues, as needed Users are notified as projects reach specific milestones, either by automated … of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After … Facilitate data sharing with investigators through  JGI Genome Portals Coordinate data analysis tool tutorials, as …

… Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then you’ll recognize this … with the JGI. So, submitting proposals, and then working on projects through the CSP program, yeah, is a big part of …